CDS

Accession Number TCMCG006C88882
gbkey CDS
Protein Id XP_013682575.1
Location join(31254185..31255477,31255567..31255746,31255812..31256633,31256732..31257043)
Gene LOC106387290
GeneID 106387290
Organism Brassica napus

Protein

Length 868aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013827121.2
Definition histidine--tRNA ligase, cytoplasmic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description histidine--tRNA
KEGG_TC -
KEGG_Module M00359        [VIEW IN KEGG]
M00360        [VIEW IN KEGG]
KEGG_Reaction R03655        [VIEW IN KEGG]
KEGG_rclass RC00055        [VIEW IN KEGG]
RC00523        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01007        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K01892        [VIEW IN KEGG]
EC 6.1.1.21        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00970        [VIEW IN KEGG]
map00970        [VIEW IN KEGG]
GOs GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0032543        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCGGAGAGGAGATCGGTGATTACTCTCGGAGGAAAAGGATCTTCCTTTTCGTCTTCCTCCGTTTACAAGGTCGCTTCCGGCGTCGCTAACGTACGGATCGACTCTTCTGCGATCGAGAGATTCTCCACTAAGACCCTTCCGTTGATCAAAGGAAGCTCCTTTAGTATCCCCGAAGAGTTAACGAAGGAAGAGATCCGAGCTTCTCTAGCTGTGCTCTTAAACAAGCTTCTTTTGGCAAACTCCGGTTCGGTTCGGTCTGTTCTTCCGGTTAAGATAATGGAGATTCTGAATTCAAAGGATGAGACTTTCGGGTTTGGTGACGTGGAAGTGACGGAAGGGGAGAGTGTCGTGTTGGAGAAGTCGTGTGCCACGTTGGTTGGGATATGTTCGGTTATAGATCACAAAACGACGGTTTTGTCACAGATTGTTGACTCTGTTGCTGCATTGAGCTGTGAGGCTACTAAAGGTGATATCACTTCGTTTAGCTCGTTGGATTCTGGAGATGGGTTTGGTAACAAAGACGCGATCAGTGTCGCTGGTGATCTCAAGGTTTTGCTGAATGGATCTAAAGCTGTTGGGAAGTTTGAGATCGAAGAGGTTTCGAAGATACCGAGGATTCATGGGAAGTTTAGGGATGTGGTGAGGAGCGTGCACTCGGATGCTCGGGTTGAGTTAAACTCAGGAGGTGGGAACTCTGGAGTTGGTGAGGCTTTGGGAGCTACGTTGTCAGCTTTGTGTGTGCCGATTAAAAGCTTGGGAGAATGTTCGTTCTTTCGTGCTAAGCTGTGTTTTGAGTCCATTGTAAATGAGGATCTGAGGAATCTGCTCTTGGAAAAGAGCTGTGTTGAGTATGAGAATCTGAAGAGTGGTGTTAAGTTAGCTCTCGTCGAAGAGGATCCCTGCAGATTAGCTCATAAGTTGAATGAGTGTTTGGGTATTGTGTGGAGAATCATTGGTTTGGAAGCAGCTACCGCCTATTTTGCACTTGCTGGTGGACACTTGTTTGCAACTAAAGAGGAGTCGAAGAGCGTAGATGCTGAGAAAGAGGTGTTGAAGGGAGATAAGAAAAAGAAGAAGAAAGCTGTTTTGGGGAAGGGGACAAGCGTAGTTATCGAGTTTATCAAAGAGAGATTGGTGAGTAGTAATGAGGCAGCAAATGGTGGTGACCAGGTGGAGCAAATCTTGGATCTTTATAATCCGGAGAGTCGCGGTTTCGATGACTTGTTGGCTAAAGTGAAAGAGATTGTAGAAAGTAATGAAAACAGGAGACTTCCTAAGCTTCCAAAGGGTACTCGAGATTTTGCTCAAGGAAAGATGATAATCCGAGAAAAAGCATTTTCAATCATACAGAATGTTTTCAAGAAACATGGTGCAACTGCACTTGACACTCCTGTATTTGAATTGAGAGAGACACTCATGGGGAAGTATGGAGAAGACTCAAAGCTGATCTACGATCTTGCTGATCAGGGTGGAGAGCTATGCTCTTTAAGATATGATTTAACAGTTCCATTTGCACGGTATTGTGCTATGAATGGTATCACATCGATCAAAAGATACCAAATAGCAAAGGTGTACAGAAGAGACAATCCATCTCACGGGAGGTACAGAGAGTTTTATCAGTGTGATTTCGATATCGCTGGTTTGTCTGAACCAATGGGACCTGATTTCGAAGTCGTCAAGATTTTAACTGAGCTTCTTGATAAACTCGAGATTGGAGACTATGTGGTGAAACTGAACCACAGAAAGCTGCTTGATGGGATGCTGGAGATATGTGGAGTACCAGCTGAGAAATTCAGGACCATATGCTCGAGTATCGATAAGTTAGACAAGCAAACATTTGAGCAAGTGAAGAGAGAGATGGTGGAGGAGAAAGGTTTGTCTTCAGAGGTTGCAGACAGAATAGGCAGCTTTGTCAAGGAGAAAGGAGCTCCTATGGAGCTGTTGAATAAACTGAGAGAAGAAGGGAGCGAGTTTTTAGGTAACAAGTCATCGAAAGAAGCTCTTGATGAGTTGAGTATAATGTTTGAAGCTCTAGAGAGATCAAAGTGCAGTGGGAGAGTGGTCTTTGATCTAAGTCTAGCTAGAGGTCTAGATTATTACACCGGGGTCATCTTTGAAGCCGTTTGTATAGGAGCTGAGGTTGGATCAATTGCTGCTGGTGGTCGATACGATAACCTTATAGGAATGTTTGGAAAAGAGATAGTCCCTGCGGTTGGCATGAGCCTGGGGATCGAGAGAGTGTTTAACATATTGGAAAAGAAACAAAAACTGGAAGAGAGAAAAACACGAGTTGTTCAATCTACCGAGACACAGGTTTTGGTAAGTATAATGGAGGATAATAAGCTAGGTGAAGCTGCAGAACTGGCTAGTCAGTTATGGGAAGCTGATATCAATGCAGAGTATCTTGTGAACAAAAGGAGAGGAAAGCATTTTGATCGTGCTATGAGCACGGGTTCTGAGATTCCTTGGATGGTGATTGTAGGCAAGACAGAACTCAGTGAAGGTGTTGTAACATTGAAGAAGATCCTCAAGGGAAGTGAGGAGGAAGTTAAAGGTGTTCCTAGAGACAGTTTCGTTGCAGAACTGTTGAAACGTCTCTGA
Protein:  
MAAERRSVITLGGKGSSFSSSSVYKVASGVANVRIDSSAIERFSTKTLPLIKGSSFSIPEELTKEEIRASLAVLLNKLLLANSGSVRSVLPVKIMEILNSKDETFGFGDVEVTEGESVVLEKSCATLVGICSVIDHKTTVLSQIVDSVAALSCEATKGDITSFSSLDSGDGFGNKDAISVAGDLKVLLNGSKAVGKFEIEEVSKIPRIHGKFRDVVRSVHSDARVELNSGGGNSGVGEALGATLSALCVPIKSLGECSFFRAKLCFESIVNEDLRNLLLEKSCVEYENLKSGVKLALVEEDPCRLAHKLNECLGIVWRIIGLEAATAYFALAGGHLFATKEESKSVDAEKEVLKGDKKKKKKAVLGKGTSVVIEFIKERLVSSNEAANGGDQVEQILDLYNPESRGFDDLLAKVKEIVESNENRRLPKLPKGTRDFAQGKMIIREKAFSIIQNVFKKHGATALDTPVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYDLTVPFARYCAMNGITSIKRYQIAKVYRRDNPSHGRYREFYQCDFDIAGLSEPMGPDFEVVKILTELLDKLEIGDYVVKLNHRKLLDGMLEICGVPAEKFRTICSSIDKLDKQTFEQVKREMVEEKGLSSEVADRIGSFVKEKGAPMELLNKLREEGSEFLGNKSSKEALDELSIMFEALERSKCSGRVVFDLSLARGLDYYTGVIFEAVCIGAEVGSIAAGGRYDNLIGMFGKEIVPAVGMSLGIERVFNILEKKQKLEERKTRVVQSTETQVLVSIMEDNKLGEAAELASQLWEADINAEYLVNKRRGKHFDRAMSTGSEIPWMVIVGKTELSEGVVTLKKILKGSEEEVKGVPRDSFVAELLKRL